The pmemd.cuda GPU Implementation

PDF) Accelerators for Classical Molecular Dynamics Simulations of Biomolecules

GPU-Accelerated All-atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber

Full article: Solvated and generalised Born calculations differences using GPU CUDA and multi-CPU simulations of an antifreeze protein with AMBER

Automated docking refinement and virtual compound screening with absolute binding free energy calculations

Fast and flexible gpu accelerated binding free energy calculations within the amber molecular dynamics package - Mermelstein - 2018 - Journal of Computational Chemistry - Wiley Online Library

AMBER14 & GPUs

GUI for setup and control of Amber18/20 molecular dynamics simulations

Fast Implementation of the Nudged Elastic Band Method in AMBER

Fast and Flexible GPU Accelerated Binding Free Energy Calculations within the AMBER Molecular Dynamics Package

GPU-Accelerated Implementation of Continuous Constant pH Molecular Dynamics in Amber: pKa Predictions with Single-pH Simulations